Naruto: Numerous games based on the hit manga and anime franchise since the early 2000s.Mortal Kombat: A series of fighting games which depicts as many as 15 ninja characters since 1992, including Scorpion, Sub-Zero, Mileena, Kitana and Reptile.Metal Gear Solid: A stealth-action video games that includes Gray Fox, the commando known as 'Ninja' fitted with a powerful exoskeleton and a high-tech ninja sword in Metal Gear Solid (1998), Olga Gurlukovich, a Russian woman who disguised herself with similar a robotic ninja suit in Metal Gear Solid 2: Sons of Liberty (2001), and Raiden, an another cyber ninja in Metal Gear Solid 4: Guns of the Patriots (2008) and Metal Gear Solid: Rising (2012).

Mega Man: The series has several ninja characters, sometimes playable, notably Shadow Man, debuting in Mega Man 3 (1990) and Phantom, debuting in Mega Man Zero (2002).The ninja ability also returns in Kirby: Squeak Squad (2006).

Kirby: In Kirby Super Star (1996), Biosparks are minor enemies whom Kirby can eat them to copy their abilities.

Killer Instinct: The ninja-like Tibetian fighting monk siblings Jago and Black Orchid appear to be the main characters of this fighting game series in 1994-1996.

Kessen: Strategy game series with several ninja characters and units are featured in Kessen (2000) and Kessen III (2004).

JaJaMaru-kun: A series of several action games sometimes with RPG elements, including Ninja JaJaMaru-kun (1985), JaJaMaru Gekimaden: Maboroshi no Kinmajou (1990) and Ganso JaJaMaru-kun (1999).

Izuna: Legend of the Unemployed Ninja (2006) and its sequel Izuna 2: The Unemployed Ninja Returns (2007).

Guilty Gear: The character Chipp Zanuff (debuting in the first game in 1998) takes up the fighting style after being saved from the mafia by a ninja master.

Joe: Several video games featuring ninja characters from the comic book and cartoon series, such as Snake Eyes and Storm Shadow. It is known in English as Legend of the Mystical Ninja.

Ganbare Goemon: A long-running (since 1986) fantasy comedy series of games that are very loosely based around the historical character of Ishikawa Goemon, featuring the titular character Goemon, as well as other recurring ninja characters such as Ebisumaru and Yae.Flame of Recca: Several video game adaptations of the manga and anime series.Final Fight: Guy in the first game (1989) and Maki Genryusai in the second one (1993), both being members of the Bushin clan.Final Fantasy: Edge in Final Fantasy IV (1991), Shadow in Final Fantasy VI (1994) and Yuffie Kisaragi in Final Fantasy VII (1997) and its spin-offs (as well as in the Kingdom Hearts series), are some of the ninja characters in the Final Fantasy games.Fatal Fury and The King of Fighters: Feature several ninja characters, most prominently the female ninja Mai Shiranui (since 1992).Dead or Alive: A fighting game series since 1996, featuring several ninja characters including Ayane (also as a minor character in Ninja Gaiden), Hataye, and Kasumi, the runaway ninja who is the series' main character.Bushido Blade: An attempt at a realistic fighting game involving weapons and a number of ninja characters (1997-1998).Battle Raper: The characters include the ninja girls Mai Kisaragi in Battle Raper (2002) and Setsuna Yagami in Battle Raper 2 (2003).Arcana Heart: The ' doggirl' Konoha since 2006.Arc the Lad: The gun-wielding ninja Shu in several of the games in the series, most notably in Arc the Lad II (2002) where he is one of the protagonists.Aero Fighters (known as Sonic Wings in Japan): The Japanese aircraft is flown by a ninja pilot Hien, who appears in all games from the series since 1992.

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